Showing posts with label biological physics. Show all posts
Showing posts with label biological physics. Show all posts

Wednesday, 23 September 2015

SPIE OTOM XII Conference Proceedings

The proceedings of the SPIE Optical Trapping and Optical Manipulation Conference XII, held in San Diego in August 2015 have been published, including three contributions from the UCL Optical Tweezers Group:


T. J. Smart, C. J. Richards, R. Bhatnagar, C. Pavesio, R. Agrawal and P. H. Jones.  'A study of red blood cell deformability in diabetic retinopathy using optical tweezers', Proc SPIE 9548, Trapping and Optical Micromanipulation XII, 945820, doi 10.1117/12.2191281 (2015)
From the abstract: Diabetic retinopathy (DR) is a microvascular complication of diabetes mellitus (DM) in which high blood sugar levels cause swelling, leaking and occlusions in the blood vessels of the retina, often resulting in a loss of sight. The microvascular system requires red blood cells (RBCs) to undergo significant cellular deformation in order to pass through vessels whose diameters are significantly smaller than their own. There is evidence to suggest that DM impairs the deformability of RBCs, and this loss of deformability has been associated with diabetic kidney disease (or nephropathy) - another microvascular complication of DM. However, it remains unclear whether reduced deformability of RBCs correlates with the presence of DR.

Here we present an investigation into the deformability of RBCs in patients with diabetic retinopathy using optical tweezers. To extract a value for the deformability of RBCs we use a dual-trap optical tweezers set-up to stretch individual RBCs. RBCs are trapped directly (i.e. without micro-bead handles), so rotate to assume a `side-on' orientation. Video microscopy is used to record the deformation events, and shape analysis software is used to determine parameters such as initial and maximum RBC length, allowing us to calculate the deformability for each RBC.  A small decrease in deformability of diabetes cells subject to this stretching protocol is observed when compared to control cells.

T. J. Smart, C. J. Richards, Xiang Han, S. Siwiak-Jaszek and P. H. Jones.  'Correlated fluctuations of optically trapped particles',  Proc SPIE 9548, Trapping and Optical Micromanipulation XII, 945823, doi 10.1117/12.2190820 (2015)
From the abstract: We present a study of correlated Brownian fluctuations between optically confined particles in a number of different configurations.  First we study colloidal particles held in separate optical tweezers.  In this configuration the particles are known to interact through their hydrodynamic coupling, leading to a pronounced anti-correlation in their position fluctuations at short times.  We study this system and the behavior of the correlated motion when the trapped particles are subject to an external force such as viscous drag.

The second system considered is a chain of optically bound particles in an evanescent wave surface trap.  In this configuration the particles interact both through hydrodynamic and optical coupling.  Using digital video microscopy and subsequent particle tracking analysis we study the thermal motion of the chain and map the covariance of position fluctuations between pairs of particles in the chain.  The experiments are complemented by Brownian motion simulations. 

C. J. Richards, T. J. Smart, P. H. Jones and D. Cubero.  'Low frequency dynamical stabilisation in optical tweezers', Proc SPIE 9548, Trapping and Optical Micromanipulation XII, 945825, doi 10.1117/12.2190822 (2015)
From the abstract: It is well known that a rigid pendulum with minimal friction will occupy a stable equilibrium position vertically upwards when its suspension point is oscillated at high frequency.  The phenomenon of the inverted pendulum was explained by Kapitza by invoking a separation of timescales between the high frequency modulation and the much lower frequency pendulum motion, resulting in an effective potential with a minimum in the inverted position.

We present here a study of a microscopic optical analogue of Kapitza's pendulum that operates in different regimes of both friction and driving frequency.  The pendulum is realized using a microscopic particle held in a scanning optical tweezers and subject to a viscous drag force.  The motion of the optical pendulum is recorded and analyzed by digital video microscopy and particle tracking to extract the trajectory and stable orientation of the particle.  In these experiments we enter the regime of low driving frequency, where the period of driving is comparable to the characteristic relaxation time of the radial motion of the pendulum with finite stiffness.

In this regime we find stabilization of the pendulum at angles other than the vertical (downwards) is possible for modulation amplitudes exceeding a threshold value where, unlike the truly high frequency case studied previously, both the threshold amplitude and equilibrium position are found to be functions of friction.  Experimental results are complemented by an analytical theory for induced stability in the low frequency driving regime with friction.

Monday, 16 December 2013

PhD studentship available

A PhD studentship is available to start in September 2014 on a project entitled Membrane engineering of artificial lipid vesicles. The goal of this project is to use optical tweezers to probe the mehanical properties of biomimetic vesicles undergoing temperature or light-induced phase or structural transformation, and to use the results of these studies to engineer membrane materials with properties optimised for applications including controlled drug release and microreactors.

Experimental work will be carried out in the Optical Tweezers Group in the Department of Physics & Astronomy at UCL and in the Biological Soft Matter Group in the School of Materials Science at the Japan Advanced Institute of Science & Technology (JAIST).  The project is jointly supervised by Dr Phil Jones (UCL) and Dr Tsutomu Hamada (JAIST).

The studentship will pay a stipend and fees at the rate applicable for UK/EU students for three years.  The student will be registered for a PhD at UCL where they will spend the first and third years.  The second year of the PhD will be spent at JAIST.

Please contact Dr Phil Jones for further details or to express an interest.

Monday, 3 October 2011

New Group Members

Kelly Thorneycroft has joined the UCL Optical Tweezers Group for her MSci project.  Kelly is a fourth year undergraduate studying Natural Sciences and will be working on optical trapping and binding experiments and biophysical applications.

Thursday, 17 February 2011

Optical Techniques in Biological Physics Meeting

The Biological Physics Group of the Department of Physics and Astronomy is hosting a half-day meeting on Thursday 17 February, on the subject of 'Optical Techniques in Biological Physics'.  The meeting brings together researchers from the physical and life sciences with an interest in optical techniques (imaging, spectroscopy, optical traps, etc) for a series of short talks and discussions on opportunities for future interdisciplinary work.  The programme for the day is:

2.00 Introduction (Phil Jones)
2.10 Clare Elwell (Medical Physics & Bioengineering) The use of near infra-red spectroscopy to measure tissue oxygenation, haemodynamics and metabolism
2.40 Angus Bain (Physics) Time-resolved fluorescence studes of biomolecular structure, interactions & dynamics
3.10 Angus Silver (NPP) The acousto-optics lens two-photon microscope and its application to neuroscience
3.40 Tea break
4.00 Chris Thrasivoulou (Cell & Developmental Biology) title tbc
4.30 Guillaume Charras (LCN) Imaging challenges in molecular cell biology

5.00 Open discussions